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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797559.1_cds_XP_016455585.1_4900
CDS Infomation

[gene=LOC107779640] [db_xref=GeneID:107779640] [protein=probable aquaporin NIP-type] [protein_id=XP_016455585.1] [location=complement(join(31559..31757,32037..32098,32211..32408,33374..33598,33723..33866))] [gbkey=CDS]
Sequence

ATGGCAGCGCAGATTGAAGGTATCCGAGAAGATGAAATCTCCAAACTGGAAGAAGGTGTC
CGTGCAGATAATATATGTGCGTCCCAGTCTAACACTAGCATAGGATTTTGTTCATCACCT
TCCGTTGTTGCTGTTGCACAAAAGTTGATTGCAGAGGCAATTGGGACGTACTTTATTATA
TTTGCAGGATGTGGATCAGTAGCAGTGAATAAGCTATACGATGGGAGTATTACGTTTCCA
GGGATTTGCGTGACATGGGGTCTAATTGTGATGGTTATGATTTACTCTTTGGGACACGTA
TCTGGAGCTCATTTTAATCCTGCTGTGACGATCGCTTTCACTATCTTCCGTCGTTTCTCA
TGGAAACTGGCACCTTTGTACATAATAGCTCAACTAACGGGCTCAATTCTATCAAGCGGC
ACATTAGCACTATTGTTGGACGTCACTTCCACATCTTATTTTGGTACTGTTCCAGTAGGA
TCTAATGGCCAATCTTTGGCTATGGAAATCATCATTTCCTTCCTCCTAATGTTCGTTGTT
TGCGGAGTTTCTACAGATGTTAGAGCGATAGGAGAACTAAGTGGATTGGCAGTTGGAATG
ACAATAACCTTGAATGTCTTTGTTGCCGGGCCAATTTCAGGAGCATCGATGAATCCAGCA
AGGAGCATTGGTCCAGCGATTGTGAAGCAAGTCTATAAAGGTCTTTGGGTGTATATAATT
GGGCCAGTCATCGGAACTCTAGCGGGAGCGTTTGTATACAACTTAATTAGATTTACGAAT
AAACCACTTCTTCAACTAGTTAAAAGTAGATCCTTTCTTCGAAGTTAA

Peptide Sequence

PEP ID

XP_016455585.1
PEP Infomation

PREDICTED: probable aquaporin NIP-type [Nicotiana tabacum]
Sequence

MAAQIEGIREDEISKLEEGVRADNICASQSNTSIGFCSSPSVVAVAQKLIAEAIGTYFII
FAGCGSVAVNKLYDGSITFPGICVTWGLIVMVMIYSLGHVSGAHFNPAVTIAFTIFRRFS
WKLAPLYIIAQLTGSILSSGTLALLLDVTSTSYFGTVPVGSNGQSLAMEIIISFLLMFVV
CGVSTDVRAIGELSGLAVGMTITLNVFVAGPISGASMNPARSIGPAIVKQVYKGLWVYII
GPVIGTLAGAFVYNLIRFTNKPLLQLVKSRSFLRS

Transcript Sequence

Gene sequence data has not been registered.